Insertion junction: CLIP2.045618_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045618
Chromosome:chromosome 3
Location:6720611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195950 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCACGTCCTGCAGCTCGCTCACAAACGCCAGCCGCTGCGCATACGCCG
Internal bar code:TCGCCGCAAATCATTGGGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3380
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGCGTGCTACACTACA
Suggested primer 2:TAACCGACCCCAAGTGCATC