Insertion junction: CLIP2.045619_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045619
Chromosome:chromosome 12
Location:2335946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508100 (1 of 2) PTHR21580//PTHR21580:SF21 - SHIPPO-1-RELATED // O(6)-METHYLGUANINE-INDUCED APOPTOSIS 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGAGCAGTCTTTGGCCGGTAGTCCGTGCCCGCCGGCCCGTTGTTGGC
Internal bar code:ACTGCGTCTTAGCGGCTAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:956
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCAACAGCCCCTGCATA
Suggested primer 2:TGAAACGAGTGTCCTCCGTG