Insertion junction: CLIP2.045625_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045625
Chromosome:chromosome 2
Location:2321009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090600 NUP43 Nucleoporin 43; (1 of 1) PTHR22652:SF0 - NUCLEOPORIN NUP43 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTAACATCGTAACCGTGCATTGTAACCGTGCATTGCAACCATGCATT
Internal bar code:ATCGGCAGACCGCAATAACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGGTGAAGCACGAGGTG
Suggested primer 2:CACATCACCTACCCACCACC