Insertion junction: CLIP2.045625_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045625
Chromosome:chromosome 2
Location:2321012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090600 NUP43 Nucleoporin 43; (1 of 1) PTHR22652:SF0 - NUCLEOPORIN NUP43 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTCATGATTGGTTGAGAACTGAAGGCGTAGCCAGGAACAGAGGTATA
Internal bar code:ATCGGCAGACCGCAATAACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:359
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACATCACCTACCCACCACC
Suggested primer 2:AGAAGGTGAAGCACGAGGTG