Insertion junction: CLIP2.045634_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045634
Chromosome:chromosome 8
Location:1676190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g366101 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAGCTAGCTGTGCGATTGTCCCCAGCGGCACGCACATTGGTTTTCGC
Internal bar code:GGTTTTGTCCGGGTTACGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1523
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATGAACGGCTACCCCT
Suggested primer 2:GCCGCACCCTATATCCTGTC