Insertion junction: CLIP2.045635_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045635
Chromosome:chromosome 1
Location:4507546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030800 CSN2 COP9 signalosome subunit; (1 of 1) K12176 - COP9 signalosome complex subunit 2 (COPS2, CSN2, TRIP15) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGATTAGTATAAGACTACCCCCTATCTCCTGGCCCTATCTCCCGCCCC
Internal bar code:GCATTATCGGTATTGCCCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:497
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCGCGTATTACGTAGT
Suggested primer 2:GTTCAGCAGGCAAACAGGTG