Insertion junction: CLIP2.045636_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045636
Chromosome:chromosome 12
Location:3948894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515450 UBC22 (1 of 2) K10573 - ubiquitin-conjugating enzyme E2 A (UBE2A, UBC2, RAD6A); E2 Ubiquitin conjugating enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGAGTGATCAAAACACGGAACTCCTCACGTGCTTGACTGGCATTGGC
Internal bar code:CGGGAGCTGGGGCTGAAGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:672
LEAP-Seq percent confirming:3.57143
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCATATGAGCCACACG
Suggested primer 2:AAAATGCACCTTGCCACGTC