Insertion junction: CLIP2.045637_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045637
Chromosome:chromosome 3
Location:8251033
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199800 HYD1,HYDA1 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGGAGGGCAGCGAGCTGCTGCACCGCCTCACCGAGCACCTGGAGGC
Internal bar code:CTGACTTCGTATGGTATCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:443
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTTCTTTTCCGCTAGGT
Suggested primer 2:CCAACGCCTCTGTCAGCTAA