Insertion junction: CLIP2.045642_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045642
Chromosome:chromosome 9
Location:3539009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396475 (1 of 1) PTHR24202//PTHR24202:SF4//PTHR24202:SF52 - FAMILY NOT NAMED // E3 UBIQUITIN-PROTEIN LIGASE MIB2 // E3 UBIQUITIN-PROTEIN LIGASE MIB1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGATGCGGCAGTGTTGGTGGACACGGCGGCGGTGGCGGCATTGCC
Internal bar code:GCGGATGTATATGAGGTTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCGAATCAGGATCCAGG
Suggested primer 2:AATACAGCTGAGCCTGCAGG