Insertion junction: CLIP2.045644_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045644
Chromosome:chromosome 3
Location:276499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144404 (1 of 14) PF03133 - Tubulin-tyrosine ligase family (TTL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGAGAGCAGCGGCAGCGGAGGGGCCGGCGGCTGCAGCAGCCAGGTCG
Internal bar code:TCCCTCGATTCGCAGGTATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCAAGTGTTGTCGTGTG
Suggested primer 2:CACACGACAACACTTGGCTG