Insertion junction: CLIP2.045645_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045645
Chromosome:chromosome 16
Location:1973114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656400 SQD1 (1 of 1) 3.13.1.1 - UDP-sulfoquinovose synthase / Sulfite:UDP-glucose sulfotransferase; UDP-sulfoquinovose synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGGTTCACGCATCAACAGCAAGGGCTACCGGCCTGCGTCGTCACTGC
Internal bar code:CGTATAAAATGTGTAGCGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:405
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAACACGTGGCATTGTGC
Suggested primer 2:GCGAATCCGGTACATAGCCA