Insertion junction: CLIP2.045652_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045652
Chromosome:chromosome 13
Location:3407198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586800 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGAACATGGCCTCACAAGATTAGGAGTAGGAGGACGGGGAGTAGGAGG
Internal bar code:AATCTCCAGATCTTTGGATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3865
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:138
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:138

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCTTCCATACTGCCCA
Suggested primer 2:AGCGATGCTGGAGTATCTGC