Insertion junction: CLIP2.045655_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045655
Chromosome:chromosome 8
Location:4108830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383250 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCAAGGAGGCAGTACAGAGGCGCGGGCCGGTGGGGCAGCCCACCGTG
Internal bar code:GCTCGTTCGAAACTTGGGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1204
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGACTGTCCGTTTCACT
Suggested primer 2:AACCTTTTCTCGCCCTCCTG