Insertion junction: CLIP2.045665_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045665
Chromosome:chromosome 17
Location:5793814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741250 PHR1,PHR6 (1 of 1) 2.5.1.77 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; 7%252C8-didemethyl-8-hydroxy-5-deazariboflavin synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTGATCGCTCTTCCTCTCCTTCCTGTCTGTCATGCACAGCTGCCCTG
Internal bar code:CTCCGTAGTCCAGTTGAATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1303
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGGAGCGGTTGAAGCAG
Suggested primer 2:CATGTGTGTGCTAGAGGGCA