Insertion junction: CLIP2.045666_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045666
Chromosome:chromosome 12
Location:3201474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500050 (1 of 19) PF00397 - WW domain (WW) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCAGATAACATACCGCAAATGAAATACTTCTTTTTAAACGAGGTGCG
Internal bar code:TGTTGTTCACCTTTGTTCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:835
LEAP-Seq percent confirming:24.3902
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCACAACACCAAACCAG
Suggested primer 2:CCAGCGAGAATGGGACCTTT