Insertion junction: CLIP2.045668_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045668
Chromosome:chromosome 12
Location:3354946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498350 RBM25,SRE1,SRS7 Pre-mRNA splicing factor, SR-related; (1 of 1) K13168 - splicing factor, arginine/serine-rich 16 (SFRS16) 3'UTR
Cre12.g498400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGTCCTCGTGTGCTTGTGGTAGGGAAGCTGTATCAACGCGCCACAG
Internal bar code:CAACGGTGCTCAGCGTATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGCGTTGAAGCTGCTTG
Suggested primer 2:GTTGGGTATGGGTGAGGGTG