Insertion junction: CLIP2.045668_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045668
Chromosome:chromosome 12
Location:3355001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498350 RBM25,SRE1,SRS7 Pre-mRNA splicing factor, SR-related; (1 of 1) K13168 - splicing factor, arginine/serine-rich 16 (SFRS16) 3'UTR
Cre12.g498400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCCATCCCGCGCGTGCCACCTTCTCACGCCACCGCCATCCCCTCGC
Internal bar code:AAGCATTAGATGGTTCTACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2659
LEAP-Seq percent confirming:69.0909
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGTATGGGTGAGGGTG
Suggested primer 2:AAAGGCGTTGAAGCTGCTTG