Insertion junction: CLIP2.045673_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045673
Chromosome:chromosome 12
Location:238846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAGCGGTCCGGCAACCGATGCAAAGATGGGCGCTTGTTGCGAGCGCC
Internal bar code:ATCAGTCATTTAGGGGAGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1631
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCCCTCGCAGATACATC
Suggested primer 2:CGTGGTGAAGGAGAACGTCA