Insertion junction: CLIP2.045685_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045685
Chromosome:chromosome 16
Location:2640921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661400 (1 of 1) PTHR22979 - ZINC FINGER PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGGGCACGGGGTGCGGGGCATGGGGTTGCGGGACATGGGGTTGCG
Internal bar code:GCGGACTCGCACTGCCTACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGCTGCTCGCTTTGGAC
Suggested primer 2:TTTCGACACAGGAGCACCTC