Insertion junction: CLIP2.045712_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045712
Chromosome:chromosome 14
Location:2554124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624900 FAP171 Flagellar Associated Protein 171; (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGGAAGGACAGCGCCTGGGGCAGCAGTAAAGGGTCCCCTCCTGACG
Internal bar code:GCTCGGGTAGGGTCTAAGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATCGGCGAAATGAACGG
Suggested primer 2:GACCTGCAGTCCTCACAACA