Insertion junction: CLIP2.045718_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045718
Chromosome:chromosome 1
Location:4131679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027500 (1 of 2) IPR001870//IPR003877//IPR013320 - B30.2/SPRY domain // SPRY domain // Concanavalin A-like lectin/glucanase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGTAACGCGGGCATAGCAGCCACAGCCTTCCCTTTGTACCGTAGCCT
Internal bar code:CCGGTGAATACAATGCAGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:970
LEAP-Seq percent confirming:32.2581
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTTTGAGGTGCGTC
Suggested primer 2:TCACTCGAGCACCACATCAC