Insertion junction: CLIP2.045731_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045731
Chromosome:chromosome 13
Location:445002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTTGTTGTTCTAGCCGGTCCCCCGCAATCCAGCCCCTGCGCTTGCA
Internal bar code:TGTCTGTTGTGGTACACACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:651
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTTTACCCACTGGTCAG
Suggested primer 2:CGGCAAATGTCCCATGCAAA