Insertion junction: CLIP2.045733_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045733
Chromosome:chromosome 13
Location:4053471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590750 HTB21,HTB37 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGGCTCAGCAGCCTCGGGAGCGGCCGCGTCCTTCTTCTCGTCCTTC
Internal bar code:GCGCAGCAAAAGTGTGGACCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2854
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCCTTCTTCAGGTAGCG
Suggested primer 2:AGTCTGGATCTGGGTCTCCC