Insertion junction: CLIP2.045739_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045739
Chromosome:chromosome 6
Location:6417403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293516 DEGO2 (1 of 4) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC; Inactive Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGCAGTAGGGCTGCCGCCACGGAAGCAGCCACAGCCCACGTACCCA
Internal bar code:GCCTGGGTTTGTCCTCTTACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:148
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTACTGCTGCTACTGCCG
Suggested primer 2:CACACACAACCTCCTCCTCC