Insertion junction: CLIP2.045745_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045745
Chromosome:chromosome 6
Location:4657011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278451 PDK2 Pyruvate dehydrogenase kinase; (1 of 2) 2.7.11.2 - [Pyruvate dehydrogenase (acetyl-transferring)] kinase / Pyruvate dehydrogenase kinase (phosphorylating) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACCTTGGGCGGACGGATTCCCTAGCAAGCATCAGGCGGCTAGCAGC
Internal bar code:GTACCCGAGTGGTCTTGGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:608
LEAP-Seq percent confirming:53.7037
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGCTACGGGTAGAATGC
Suggested primer 2:CTGGGTCCGGAGCTTCTTTT