Insertion junction: CLIP2.045773_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045773
Chromosome:chromosome 10
Location:2567162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436500 XPP SurE-like phosphatase/nucleotidase; (1 of 1) PTHR30457:SF0 - 5'/3'-NUCLEOTIDASE SURE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTGCGCCCCTGTCCCTTGCCATCCGCCGCTCCTCCCCGCTCGAGTC
Internal bar code:CAGTTATTCTCGCTATTATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTTGGCGTGTGTGTTCC
Suggested primer 2:CTGGCTCCAATCGGCATTTG