Insertion junction: CLIP2.045776_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045776
Chromosome:chromosome 9
Location:2661961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392000 (1 of 3) PF09763 - Exocyst complex component Sec3 (Sec3_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCCTCCTCCTCCTCCTGCCCCTCCGGCAGGTGGGCGACGTGGCGGA
Internal bar code:ATGAGTCCTCGGTAGTGGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:401
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGGGTTGCATTCATGA
Suggested primer 2:GGGGGTTGTAAGTACCAGCC