Insertion junction: CLIP2.045788_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045788
Chromosome:chromosome 11
Location:862090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467649 OPR107 OctotricoPeptide Repeat protein 107; (1 of 1) IPR010622//IPR016024 - FAST kinase leucine-rich // Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACTGACGAAAGACATCACGACTGAAGGCTGCAGGCACTCAGCGGAAGC
Internal bar code:AACCTTTTGTCATTGTAACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1402
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAATGGCAGGAGGAGGC
Suggested primer 2:CGAGGAAACTGCCCTGTTCT