Insertion junction: CLIP2.045795_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045795
Chromosome:chromosome 3
Location:4275740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800328 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTATGATCATGGAGGGCTGCGCACCCGCTTGATGCATCTAGCATGT
Internal bar code:GTAAGGGTTTCACGAATTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2383
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCTCTAGTGACACTGGC
Suggested primer 2:CCAGCATTGCTTCACGATCG