Insertion junction: CLIP2.045805_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045805
Chromosome:chromosome 16
Location:1500664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653000 (1 of 1) K18404 - tudor domain-containing protein 3 (TDRD3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGGCTGTATGGCTGTGTGGCTGTGTACGCAATCCGAAGCCACAGTG
Internal bar code:CCAGAGTTCGTGGAACATAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2917
LEAP-Seq percent confirming:88.5057
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCAACGTTGGAAGCGCAG
Suggested primer 2:CGGGTGATACAGCTACGACC