Insertion junction: CLIP2.045806_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045806
Chromosome:chromosome 9
Location:2789138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391100 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGAACGTCGGCTGCGCCTCTGCGCACTGATGCATGCTCAACTTTAT
Internal bar code:CTGGTTTATGCCGGAGCAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4558
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTGTTTCTGCACGTGTG
Suggested primer 2:GAGCAGAAGGGTCGGAAACA