Insertion junction: CLIP2.045810_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045810
Chromosome:chromosome 12
Location:5866908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533400 (1 of 1) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGCAGCAACCCAGGCAACACACGCTGCAGGACGCCACCGGATCACTG
Internal bar code:GCTTAGTCACTGGACTTCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2677
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATGAGCACCGTTTCTGT
Suggested primer 2:CATCATTCAGGAGCGCTTGC