Insertion junction: CLIP2.045826_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045826
Chromosome:chromosome 8
Location:2831880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373878 RAA13 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; putative protein kinase associated with psaA trans-splicing complex CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGGAGCGGCGGGGTCGGGCAGTCCGGTGCGGGCGATGGCTGGCCTG
Internal bar code:TCACGCTCATTGTTAAAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGAGACGACGACTGTTG
Suggested primer 2:ACATGACTTCCGTGGTCACC