Insertion junction: CLIP2.045833_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045833
Chromosome:chromosome 9
Location:4996999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g405400 PFD1,PFP3 Prefoldin molecular chaperone, subunit 1-related protein; (1 of 1) K09548 - prefoldin subunit 1 (PFDN1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCCCATCGATCCCAAGAACCCCACGCTGCAGCCTGCACGCCTTTCG
Internal bar code:CGGGCTTTGACCTCTGAGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1830
LEAP-Seq percent confirming:89.3617
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCCCTGCATGCAAACCG
Suggested primer 2:TGAACGCCCTTTCTCCACTC