Insertion junction: CLIP2.045833_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045833
Chromosome:chromosome 9
Location:4997014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g405400 PFD1,PFP3 Prefoldin molecular chaperone, subunit 1-related protein; (1 of 1) K09548 - prefoldin subunit 1 (PFDN1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGAGCCACAGCCGTCGCACACGGCAGTTGTGCGCCAACCCGCAACACG
Internal bar code:AGACTCTGACGTCCGGGGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACGCCCTTTCTCCACTC
Suggested primer 2:TTTTCCCTGCATGCAAACCG