Insertion junction: CLIP2.045835_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045835
Chromosome:chromosome 6
Location:952606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGCGCGAAAGCTATCGTCACCGAGTTGTCCTCGTAATCCCCCGTCAA
Internal bar code:AGGGTTTGGCGGAGACTGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1769
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTTGCCGTGTTGGTTTC
Suggested primer 2:CCAGGGAGGGCAAGTTAGTG