Insertion junction: CLIP2.045836_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045836
Chromosome:chromosome 9
Location:5731164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410600 PPP34 (1 of 3) K17499 - protein phosphatase 1G [EC:3.1.3.16] (PPM1G, PP2CG); Phosphoprotein phosphatase 2C-related 3'UTR
Cre09.g410650 HIS1 (1 of 1) 2.4.2.17 - ATP phosphoribosyltransferase / Phosphoribosyl-ATP pyrophosphorylase; N-5-phosphoribosyl-ATP transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCATTCGCATTACACGCACGCTGCCGCGGTGCCTGCTCCTGCCGTTG
Internal bar code:ATCATCTTACGGGTGGTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATGTAAGGCTGAATGG
Suggested primer 2:TGCGGTAACTTCGTGCTCTT