Insertion junction: CLIP2.045840_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045840
Chromosome:chromosome 10
Location:3166331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441750 (1 of 4) PTHR11772//PTHR11772:SF2 - ASPARAGINE SYNTHETASE // ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCAACCTGTGTCCTTCCCCTGTCAGGTACGCCGAGGCTGCCCCCAA
Internal bar code:TTGAAGGACGTACTAGACGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2052
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGGTTAGGGAACACCAT
Suggested primer 2:CCAACTGTACGCTTTTGCCC