Insertion junction: CLIP2.045848_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045848
Chromosome:chromosome 9
Location:2400503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393750 (1 of 1) PTHR24031:SF284 - DEAD-BOX HELICASE DBP80 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCTAAGACCAACCCGGTAATCCAATACCCGCAGCACACTGACCACCC
Internal bar code:TTGAGCTAAAGTACACTCCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGGGTTAGGAGCAGCGA
Suggested primer 2:CACTTGTCCGGGTGTGTCAG