Insertion junction: CLIP2.045852_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045852
Chromosome:chromosome 11
Location:2546747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095098 (1 of 1) PTHR11306:SF0 - EPIDIDYMAL SECRETORY PROTEIN E1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTCATGCATGCCGGATTGCCGGCGTTGGGAGGAGAGCACAACCGCCA
Internal bar code:TAAGGACACCAAGCGGACATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCAGGTCAGATTGGGGG
Suggested primer 2:CCTTTTCGCACTTTCCGCAA