Insertion junction: CLIP2.045853_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045853
Chromosome:chromosome 6
Location:3907796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278190 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCACCCCTTGATCACGTGTGGGAAGTAAACGGCCAGGCCTGTGTGCA
Internal bar code:GACTGTATGTGATGGCAAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2397
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATGACTCAGCCCAAGC
Suggested primer 2:CGTGTGCATGTGTGTTTCGT