Insertion junction: CLIP2.045854_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045854
Chromosome:chromosome 9
Location:3439106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395843 (1 of 2) PTHR10579 - CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCACGAGGCGCGCGATCACCTGCTCCTGCGACTGGCCGCCGGCAGCC
Internal bar code:CTGACGGAGTACCCATGTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1256
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCAAACTACTAACTCGC
Suggested primer 2:CGTGCAGCATATTTGTCCCG