Insertion junction: CLIP2.045861_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045861
Chromosome:chromosome 4
Location:3003227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225000 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGCAACAGGGGCAGCACGGCTCGCCTCTACCCCACGGCGCGCCCCG
Internal bar code:TATACTCAAGTAAATGTATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCCTGGTACTGTTGCTG
Suggested primer 2:CGAAGATGACGACGAGGAGG