Insertion junction: CLIP2.045861_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045861
Chromosome:chromosome 4
Location:3003241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225000 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCTGCTGCTGCAGCAGGTGCTGCCGTGCCTGTGCCTGCGCCTGACGA
Internal bar code:TATACTCAAGTAAATGTATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGATGACGACGAGGAGG
Suggested primer 2:TGCTCCTGGTACTGTTGCTG