Insertion junction: CLIP2.045877_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045877
Chromosome:chromosome 11
Location:266303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467559 (1 of 1) IPR003590//IPR006553 - Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAGGCCTGGCAGGCGTGCAAGCCGCGGTTGCTAGAGACGTGGAAACGA
Internal bar code:TTGGGTGGACGGCAAAAAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:466
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGGAAAAGGTCACGCAG
Suggested primer 2:AGCTCGACTTTCCAAGGTGG