Insertion junction: CLIP2.045886_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045886
Chromosome:chromosome 1
Location:7608445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g053300 AIH1 Agmatine iminohydrolase; (1 of 2) 3.5.3.12 - Agmatine deiminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCCTTTGAAGTGTGCCTGCACATGCATTTGATGTTGCCATGTTGTGT
Internal bar code:GGGTGATAGATGACGTCACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2071
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACGCAAGCAACTCAACG
Suggested primer 2:GAGATGCTGTGTGAGTGGCT