Insertion junction: CLIP2.045888_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045888
Chromosome:chromosome 11
Location:1557346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468383 (1 of 1) PTHR22844//PTHR22844:SF176 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTACACCAGGAAAACCAGGACCCAGGGGGGGTTGCCAAACCATGCCG
Internal bar code:TAATAGGTTATGATCACCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:555
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCCCCGTCCCTCTTCAT
Suggested primer 2:GCGTGCGGCATACAAGTAAG