Insertion junction: CLIP2.045888_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045888
Chromosome:chromosome 11
Location:1557359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468383 (1 of 1) PTHR22844//PTHR22844:SF176 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCTCCTCATTCGCCCCTTTGCCGTACGCGCCCCAACCTTCACCCCAT
Internal bar code:TAATAGGTTATGATCACCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCGGCATACAAGTAAG
Suggested primer 2:TCATCCCCGTCCCTCTTCAT