Insertion junction: CLIP2.045897_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045897
Chromosome:chromosome 17
Location:2645347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716750 (1 of 77) IPR029071 - Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGGCAGAGTGCCGAAACGTGAGCGAGAGAGACAGAGCGGGTTAGAG
Internal bar code:TTTTAATCTATACAGGCCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2152
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAACGCCGTAGCATAGC
Suggested primer 2:GCGATCGATTTGATTGGGGC