Insertion junction: CLIP2.045899_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045899
Chromosome:chromosome 10
Location:2905138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439750 (1 of 6) PTHR24114:SF2 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCTGACCAGGAAACGCGCCGCGCCGGAAGCTGAAGCCCCAATCCCCA
Internal bar code:CATCATGTTAATGGTGCCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1045
LEAP-Seq percent confirming:60.9756
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCAGGAGGCGGAAGTA
Suggested primer 2:TCGTCTTCTGCCCTCAACAC